GEN220_2025

GEN220 High Throughput Data Analysis


Project maintained by biodataprog Hosted on GitHub Pages — Theme by mattgraham

Github introduction

  1. Create a Github.com account
  2. Add your account to google sheet
  3. read the directions on how to run visual studio - this is linked through your github account and allows you to run via the web or have visual studio on your laptop but connect to the hpcc server for file saving and github push/pull/commit commands as well. The goal of homework 1 is for you to practice using these tools even though they are new and maybe a little confusing. You can also just use jupyter notebook for your editing of code if you don’t want to try these other things out.

There are one homeworks for you to accept:

  1. github intro - this is to learn and pratice about github This is due Sept 30, 2025.

Github practice

  1. From first link you’ll read and follow some of the videos and instructions in the github intro repository.

  2. Create SSH keys to login to HPCC. You will also want to setup SSH-keys or github tokens for you.